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病毒基因组
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基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV20547033 hCoV-19/deer/USA/MA-22-002350-032/2021 EPI_ISL_16464978 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-29 Odocoileus virginianus 29781 2023-01-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29763 99.94
OEAV20547034 hCoV-19/deer/USA/MN-22-006202-023/2021 EPI_ISL_16464985 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-07 Odocoileus virginianus 29727 2023-01-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 28141 94.66
OEAV20547035 hCoV-19/deer/USA/MN-22-011177-020/2021 EPI_ISL_16467173 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-21 Odocoileus virginianus 29757 2023-01-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29382 98.74
OEAV20547043 hCoV-19/deer/USA/NC-22-003833-008/2021 EPI_ISL_16464979 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-20 Odocoileus virginianus 29781 2023-01-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 28975 97.29
OEAV20547044 hCoV-19/deer/USA/NC-22-003833-016/2021 EPI_ISL_16464980 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-19 Odocoileus virginianus 29397 2023-01-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 28044 95.40
OEAV20547045 hCoV-19/deer/USA/NC-22-006202-033/2021 EPI_ISL_16464986 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-07 Odocoileus virginianus 29748 2023-01-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 26803 90.10
OEAV20547046 hCoV-19/deer/USA/NJ-22-010212-027/2022 EPI_ISL_16429129 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-24 Odocoileus virginianus 29394 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29394 100.00
OEAV20547047 hCoV-19/deer/USA/NJ-22-010212-031/2021 EPI_ISL_16467172 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-30 Odocoileus virginianus 29769 2023-01-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29107 97.78
OEAV20547051 hCoV-19/deer/USA/NJ-22-011177-028/2022 EPI_ISL_16467174 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-18 Odocoileus virginianus 29365 2023-01-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 28101 95.70
OEAV20547052 hCoV-19/deer/USA/NY-22-002350-016/2021 EPI_ISL_16464976 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-20 Odocoileus virginianus 29778 2023-01-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29747 99.90
OEAV20547053 hCoV-19/deer/USA/NY-22-003833-017/2021 EPI_ISL_16464981 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-21 Odocoileus virginianus 29767 2023-01-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29514 99.15
OEAV20547054 hCoV-19/deer/USA/NY-22-006202-001/2021 EPI_ISL_16464982 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-29 Odocoileus virginianus 29776 2023-01-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 28399 95.38
OEAV20547055 hCoV-19/deer/USA/NY-22-006202-012/2021 EPI_ISL_16464983 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-21 Odocoileus virginianus 29745 2023-01-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 28735 96.60
OEAV20547061 hCoV-19/deer/USA/OK-22-013500-015/2022 EPI_ISL_16429147 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-02-14 Odocoileus virginianus 29776 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29342 98.54
OEAV20547062 hCoV-19/deer/USA/OK-22-013500-030/2022 EPI_ISL_16429152 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-02-14 Odocoileus virginianus 29372 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29216 99.47
OEAV20547064 hCoV-19/deer/USA/SD-22-013500-010/2022 EPI_ISL_16429142 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-14 Odocoileus virginianus 29826 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29824 99.99
OEAV20547065 hCoV-19/deer/USA/TN-22-010212-008/2021 EPI_ISL_16467168 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-09 Odocoileus virginianus 29563 2023-01-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 27334 92.46
OEAV20547071 hCoV-19/deer/USA/WV-22-010212-029/2022 EPI_ISL_16467171 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-02-08 Odocoileus virginianus 29578 2023-01-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 28693 97.01
OEAV20547072 hCoV-19/deer/USA/WV-22-013500-001/2022 EPI_ISL_16429135 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-03-11 Odocoileus virginianus 29841 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29833 99.97
OEAV20547073 hCoV-19/deer/USA/WV-22-013500-002/2022 EPI_ISL_16467175 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-03-08 Odocoileus virginianus 29816 2023-01-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29696 99.60
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